Category Archives: 2009

PRIDE Converter: making proteomics data-sharing easy

PRIDE Converter converts mass spectrometry data from most common data formats into valid PRIDE XML for submission to the publicly available PRIDE database. It presents a convenient, wizard-like graphical user interface, and includes efficient access to the Ontology Lookup Service (OLS). … Continue reading

Posted in 2009, Publications

OMSSA Parser: an open-source library to parse and extract data from OMSSA MS/MS search results

Protein identification by MS is an important technique in both gel-based and gel-free proteome studies. The Open Mass Spectrometry Search Algorithm (OMSSA) (http://pubchem.ncbi.nlm.nih.gov/omssa) is an open-source search engine that can be used to identify MS/MS spectra acquired in these experiments. … Continue reading

Posted in 2009, Publications